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Massachusetts Institute of Technology (MIT)'s Articles

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Page 4 of 27

Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years

Authors: Yulin Wang, Jun Ye, Feng Ju, Lei Liu, Joel A. Boyd, Yu Deng, Donovan H. Parks, Xiaotao Jiang, Xiaole Yin, Ben J. Woodcroft, Gene W. Tyson, Philip Hugenholtz, Martin F. Polz and Tong Zhang

Citation: Microbiome 2021 9:199

Content type: Research Published on: 6 October 2021
Frequency-dependent force direction elucidates neural control of balance

Authors: Kaymie Shiozawa, Jongwoo Lee, Marta Russo, Dagmar Sternad and Neville Hogan

Citation: Journal of NeuroEngineering and Rehabilitation 2021 18:145

Content type: Research Published on: 25 September 2021
CoCoA-diff: counterfactual inference for single-cell gene expression analysis

Authors: Yongjin P. Park and Manolis Kellis

Citation: Genome Biology 2021 22:228

Content type: Method Published on: 17 August 2021
Assessing the filtration efficiency and regulatory status of N95s and nontraditional filtering face-piece respirators available during the COVID-19 pandemic

Authors: Deborah Plana, Enze Tian, Avilash K. Cramer, Helen Yang, Mary M. Carmack, Michael S. Sinha, Florence T. Bourgeois, Sherry H. Yu, Peter Masse, Jon Boyer, Minjune Kim, Jinhan Mo, Nicole R. LeBoeuf, Ju Li and Peter K. Sorger

Citation: BMC Infectious Diseases 2021 21:712

Content type: Research article Published on: 29 July 2021
Daily, oral FMT for long-term maintenance therapy in ulcerative colitis: results of a single-center, prospective, randomized pilot study

Authors: Jessica W. Crothers, Nathaniel D. Chu, Le Thanh Tu Nguyen, Magen Phillips, Cheryl Collins, Karen Fortner, Roxana Del Rio-Guerra, Brigitte Lavoie, Peter Callas, Mario Velez, Aaron Cohn, Ryan J. Elliott, Wing Fei Wong, Elaine Vo, Rebecca Wilcox, Mark Smith…

Citation: BMC Gastroenterology 2021 21:281

Content type: Research Published on: 8 July 2021
Using Robinson-Foulds supertrees in divide-and-conquer phylogeny estimation

Authors: Xilin Yu, Thien Le, Sarah A. Christensen, Erin K. Molloy and Tandy Warnow

Citation: Algorithms for Molecular Biology 2021 16:12

Content type: Research Published on: 28 June 2021
3D Printed frames to enable reuse and improve the fit of N95 and KN95 respirators

Authors: Malia McAvoy, Ai-Tram N. Bui, Christopher Hansen, Deborah Plana, Jordan T. Said, Zizi Yu, Helen Yang, Jacob Freake, Christopher Van, David Krikorian, Avilash Cramer, Leanne Smith, Liwei Jiang, Karen J. Lee, Sara J. Li, Brandon Beller…

Citation: BMC Biomedical Engineering 2021 3:10

Content type: Research article Published on: 7 June 2021
Generalisability through local validation: overcoming barriers due to data disparity in healthcare

Authors: William Greig Mitchell, Edward Christopher Dee and Leo Anthony Celi

Citation: BMC Ophthalmology 2021 21:228

Content type: Correspondence Published on: 21 May 2021
Correction to: Restoration of bilateral motor coordination from preserved agonist-antagonist coupling in amputation musculature

Authors: Tony Shu, Shan Shan Huang, Christopher Shallal and Hugh M. Herr

Citation: Journal of NeuroEngineering and Rehabilitation 2021 18:79

Content type: Correction Published on: 12 May 2021

The original article was published in Journal of NeuroEngineering and Rehabilitation 2021 18:38
The CAT-SIR is out of the bag: tumors prefer host rather than dietary nutrients

Authors: Keene L. Abbott and Matthew G. Vander Heiden

Citation: BMC Biology 2021 19:92

Content type: Commentary Published on: 10 May 2021

The original article was published in BMC Biology 2021 19:85
Repurposing existing medications for coronavirus disease 2019: protocol for a rapid and living systematic review

Authors: Benjamin P. Geisler, Lara Zahabi, Adam Edward Lang, Naomi Eastwood, Elaine Tennant, Ljiljana Lukic, Elad Sharon, Hai-Hua Chuang, Chang-Berm Kang, Knakita Clayton-Johnson, Ahmed Aljaberi, Haining Yu, Chinh Bui, Tuan Le Mau, Wen-Cheng Li, Debbie Teodorescu…

Citation: Systematic Reviews 2021 10:143

Content type: Protocol Published on: 7 May 2021
Schema: metric learning enables interpretable synthesis of heterogeneous single-cell modalities

Authors: Rohit Singh, Brian L. Hie, Ashwin Narayan and Bonnie Berger

Citation: Genome Biology 2021 22:131

Content type: Method Published on: 3 May 2021

The Protocol to this article has been published in Nature Protocols 2024 19:s41596-024-00991-3
Molecular engineering improves antigen quality and enables integrated manufacturing of a trivalent subunit vaccine candidate for rotavirus

Authors: Neil C. Dalvie, Joseph R. Brady, Laura E. Crowell, Mary Kate Tracey, Andrew M. Biedermann, Kawaljit Kaur, John M. Hickey, D. Lee Kristensen II, Alexandra D. Bonnyman, Sergio A. Rodriguez-Aponte, Charles A. Whittaker, Marina Bok, Celina Vega, Tarit K. Mukhopadhyay, Sangeeta B. Joshi, David B. Volkin…

Citation: Microbial Cell Factories 2021 20:94

Content type: Research Published on: 1 May 2021
A flexible ChIP-sequencing simulation toolkit

Authors: An Zheng, Michael Lamkin, Yutong Qiu, Kevin Ren, Alon Goren and Melissa Gymrek

Citation: BMC Bioinformatics 2021 22:201

Content type: Software Published on: 20 April 2021
Identifying human postural dynamics and control from unperturbed balance

Authors: Jongwoo Lee, Kuangen Zhang and Neville Hogan

Citation: Journal of NeuroEngineering and Rehabilitation 2021 18:54

Content type: Research Published on: 22 March 2021
Shifts in morphology, gene expression, and selection underlie web loss in Hawaiian Tetragnatha spiders

Authors: Cory A. Berger, Michael S. Brewer, Nobuaki Kono, Hiroyuki Nakamura, Kazuharu Arakawa, Susan R. Kennedy, Hannah M. Wood, Seira A. Adams and Rosemary G. Gillespie

Citation: BMC Ecology and Evolution 2021 21:48

Content type: Research article Published on: 22 March 2021
Natural combinatorial genetics and prolific polyamine production enable siderophore diversification in Serratia plymuthica

Authors: Sara Cleto, Kristina Haslinger, Kristala L. J. Prather and Timothy K. Lu

Citation: BMC Biology 2021 19:46

Content type: Research article Published on: 15 March 2021
Restoration of bilateral motor coordination from preserved agonist-antagonist coupling in amputation musculature

Authors: Tony Shu, Shan Shan Huang, Christopher Shallal and Hugh M. Herr

Citation: Journal of NeuroEngineering and Rehabilitation 2021 18:38

Content type: Research Published on: 17 February 2021

The Correction to this article has been published in Journal of NeuroEngineering and Rehabilitation 2021 18:79
Autistic traits and individual brain differences: functional network efficiency reflects attentional and social impairments, structural nodal efficiencies index systemising and theory-of-mind skills

Authors: Subhadip Paul, Aditi Arora, Rashi Midha, Dinh Vu, Prasun K. Roy and Matthew K. Belmonte

Citation: Molecular Autism 2021 12:3

Content type: Research Published on: 21 January 2021
Microbial diversity of co-occurring heterotrophs in cultures of marine picocyanobacteria

Authors: Sean M. Kearney, Elaina Thomas, Allison Coe and Sallie W. Chisholm

Citation: Environmental Microbiome 2021 16:1

Content type: Research article Published on: 6 January 2021

Massachusetts Institute of Technology (MIT)

Massachusetts Institute of Technology (MIT)'s Articles

Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years

Frequency-dependent force direction elucidates neural control of balance

CoCoA-diff: counterfactual inference for single-cell gene expression analysis

Assessing the filtration efficiency and regulatory status of N95s and nontraditional filtering face-piece respirators available during the COVID-19 pandemic

Daily, oral FMT for long-term maintenance therapy in ulcerative colitis: results of a single-center, prospective, randomized pilot study

Using Robinson-Foulds supertrees in divide-and-conquer phylogeny estimation

3D Printed frames to enable reuse and improve the fit of N95 and KN95 respirators

Generalisability through local validation: overcoming barriers due to data disparity in healthcare

Correction to: Restoration of bilateral motor coordination from preserved agonist-antagonist coupling in amputation musculature

The CAT-SIR is out of the bag: tumors prefer host rather than dietary nutrients

Repurposing existing medications for coronavirus disease 2019: protocol for a rapid and living systematic review

Schema: metric learning enables interpretable synthesis of heterogeneous single-cell modalities

Molecular engineering improves antigen quality and enables integrated manufacturing of a trivalent subunit vaccine candidate for rotavirus

A flexible ChIP-sequencing simulation toolkit

Identifying human postural dynamics and control from unperturbed balance

Shifts in morphology, gene expression, and selection underlie web loss in Hawaiian Tetragnatha spiders

Natural combinatorial genetics and prolific polyamine production enable siderophore diversification in Serratia plymuthica

Restoration of bilateral motor coordination from preserved agonist-antagonist coupling in amputation musculature

Autistic traits and individual brain differences: functional network efficiency reflects attentional and social impairments, structural nodal efficiencies index systemising and theory-of-mind skills

Microbial diversity of co-occurring heterotrophs in cultures of marine picocyanobacteria